RegulationSpotter interactions
4:89442138NG>NT show in Ensembl
show genes instead of transcripts
transcripts between 4: 89339201-89714801
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#GENES:
#genesymbol stable_id biotype gene_start gene_end strand
HERC6 ENST00000380265 protein_coding 89299891 89364249 1
HERC6 ENST00000264346 protein_coding 89300015 89364263 1
HERC6 ENST00000506842 retained_intron 89360997 89361792 1
HERC5 ENST00000264350 protein_coding 89378268 89427314 1
HERC5 ENST00000508695 processed_transcript 89379044 89383414 1
HERC5 ENST00000508159 protein_coding 89389007 89427173 1
HERC5 ENST00000510223 retained_intron 89394161 89427312 1
HERC5 ENST00000502913 retained_intron 89394164 89427103 1
ENST00000408152 miRNA 89415084 89415168 1
ENST00000340589 processed_pseudogene 89429742 89431554 -1
PYURF ENST00000273968 protein_coding 89442136 89444964 -1
HERC3 ENST00000601319 processed_transcript 89442199 89444964 1
PIGY ENST00000527353 protein_coding 89442724 89442940 -1
HERC3 ENST00000513325 protein_coding 89444961 89570998 1
HERC3 ENST00000598772 processed_transcript 89444977 89446134 1
HERC3 ENST00000597259 processed_transcript 89445007 89446142 1
LOC100129137 ENST00000503756 processed_pseudogene 89448311 89449321 1
ENST00000516513 misc_RNA 89504817 89505123 -1
HERC3 ENST00000402738 protein_coding 89513574 89629693 1
HERC3 ENST00000431413 protein_coding 89513585 89573171 1
HERC3 ENST00000422770 protein_coding 89513635 89571046 1
HERC3 ENST00000407637 protein_coding 89513647 89578585 1
HERC3 ENST00000426683 protein_coding 89514402 89571149 1
HERC3 ENST00000452979 protein_coding 89514529 89574239 1
HERC3 ENST00000264345 protein_coding 89526945 89629686 1
HERC3 ENST00000470815 retained_intron 89579419 89591353 1
HERC3 ENST00000543130 protein_coding 89579419 89628385 1
HERC3 ENST00000504994 processed_transcript 89588607 89589804 1
HERC3 ENST00000512194 protein_coding 89591290 89608450 1
ENST00000384793 snRNA 89605999 89606105 -1
NAP1L5 ENST00000323061 protein_coding 89617066 89619386 -1
FAM13A-AS1 ENST00000500765 antisense 89630940 89651254 1
FAM13A-AS1 ENST00000511543 antisense 89642866 89649837 1
FAM13A ENST00000395002 protein_coding 89647106 89744512 -1
FAM13A ENST00000264344 protein_coding 89647106 89978323 -1
FAM13A ENST00000509478 retained_intron 89648220 89653172 -1
FAM13A ENST00000511573 retained_intron 89648220 89680620 -1
FAM13A ENST00000503556 protein_coding 89648577 89744382 -1
FAM13A ENST00000511976 protein_coding 89648580 89978311 -1
FAM13A ENST00000508369 protein_coding 89648806 89744352 -1
FAM13A ENST00000513837 protein_coding 89649330 89744381 -1
FAM13A ENST00000506433 processed_transcript 89652480 89657785 -1
FAM13A ENST00000504229 retained_intron 89652513 89653710 -1
FAM13A ENST00000502811 retained_intron 89652513 89653710 -1
FAM13A ENST00000504836 nonsense_mediated_decay 89652549 89744409 -1
FAM13A ENST00000508360 retained_intron 89652984 89671018 -1
FAM13A ENST00000511623 retained_intron 89653273 89658790 -1
FAM13A ENST00000507352 nonsense_mediated_decay 89670103 89744355 -1
FAM13A ENST00000515155 retained_intron 89671597 89680317 -1
FAM13A ENST00000502914 retained_intron 89679941 89689565 -1
FAM13A ENST00000502459 processed_transcript 89689134 90032549 -1
#INTERACTIONS:
#chr start1 end1 start2 end2 type cell
89339201 89341201 89441940 89443940 promoter overlap GM12878
89339201 89341201 89441940 89443940 promoter overlap GM12878
89441801 89443801 89504123 89506123 promoter overlap GM12878
89441801 89443801 89504123 89506123 promoter overlap GM12878
89441801 89443801 89525945 89527945 promoter overlap GM12878
89441801 89443801 89525945 89527945 promoter overlap GM12878
89441940 89443940 89447201 89449201 promoter overlap GM12878
89441940 89443940 89447201 89449201 promoter overlap GM12878
89441940 89443940 89452801 89454801 promoter overlap Foreskin keratinocyte
89441940 89443940 89452801 89454801 promoter overlap Foreskin keratinocyte
89441940 89443940 89454001 89456001 promoter overlap Foreskin fibroblast
89441940 89443940 89454001 89456001 promoter overlap Foreskin fibroblast
89441940 89443940 89454201 89456201 promoter overlap NHEK
89441940 89443940 89454201 89456201 promoter overlap NHLF
89441940 89443940 89454201 89456201 promoter overlap NHEK
89441940 89443940 89454201 89456201 promoter overlap NHLF
89441940 89443940 89454401 89456401 promoter overlap HMEC
89441940 89443940 89454401 89456401 promoter overlap HMEC
89441940 89443940 89513001 89515001 promoter overlap IMR90
89441940 89443940 89513001 89515001 promoter overlap IPS6.9
89441940 89443940 89513001 89515001 promoter overlap IMR90
89441940 89443940 89513001 89515001 promoter overlap IPS6.9
89441940 89443940 89514001 89516001 promoter overlap NHEK
89441940 89443940 89514001 89516001 promoter overlap NHEK
89441940 89443940 89531601 89533601 promoter overlap Foreskin fibroblast
89441940 89443940 89531601 89533601 promoter overlap Foreskin fibroblast
89441940 89443940 89531801 89533801 promoter overlap Foreskin keratinocyte
89441940 89443940 89531801 89533801 promoter overlap HSMM
89441940 89443940 89531801 89533801 promoter overlap Foreskin keratinocyte
89441940 89443940 89531801 89533801 promoter overlap HSMM
89441940 89443940 89532601 89534601 promoter overlap HMEC
89441940 89443940 89532601 89534601 promoter overlap HMEC
89441940 89443940 89533578 89535578 promoter overlap CD4 T
89441940 89443940 89533578 89535578 promoter overlap CD4 T
89441940 89443940 89533801 89535801 promoter overlap CD4 Naive
89441940 89443940 89533801 89535801 promoter overlap CD4 Naive
89441940 89443940 89658401 89660401 promoter overlap HSMM
89441940 89443940 89658401 89660401 promoter overlap HSMM
89441940 89443940 89712801 89714801 promoter overlap Foreskin keratinocyte
89441940 89443940 89712801 89714801 promoter overlap Foreskin keratinocyte
89442001 89444001 89504123 89506123 promoter overlap HUVEC
89442001 89444001 89504123 89506123 promoter overlap HUVEC
89442001 89444001 89525945 89527945 promoter overlap HUVEC
89442001 89444001 89525945 89527945 promoter overlap HUVEC