RegulationSpotter interactions

4:89442138NG>NT show in Ensembl
show genes instead of transcripts

transcripts between 4: 89339201-89714801

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gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene
gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene gene region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region region
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#GENES:
#genesymbol	stable_id	biotype	gene_start	gene_end	strand
HERC6	ENST00000380265	protein_coding	89299891	89364249	1	
HERC6	ENST00000264346	protein_coding	89300015	89364263	1	
HERC6	ENST00000506842	retained_intron	89360997	89361792	1	
HERC5	ENST00000264350	protein_coding	89378268	89427314	1	
HERC5	ENST00000508695	processed_transcript	89379044	89383414	1	
HERC5	ENST00000508159	protein_coding	89389007	89427173	1	
HERC5	ENST00000510223	retained_intron	89394161	89427312	1	
HERC5	ENST00000502913	retained_intron	89394164	89427103	1	
	ENST00000408152	miRNA	89415084	89415168	1	
	ENST00000340589	processed_pseudogene	89429742	89431554	-1	
PYURF	ENST00000273968	protein_coding	89442136	89444964	-1	
HERC3	ENST00000601319	processed_transcript	89442199	89444964	1	
PIGY	ENST00000527353	protein_coding	89442724	89442940	-1	
HERC3	ENST00000513325	protein_coding	89444961	89570998	1	
HERC3	ENST00000598772	processed_transcript	89444977	89446134	1	
HERC3	ENST00000597259	processed_transcript	89445007	89446142	1	
LOC100129137	ENST00000503756	processed_pseudogene	89448311	89449321	1	
	ENST00000516513	misc_RNA	89504817	89505123	-1	
HERC3	ENST00000402738	protein_coding	89513574	89629693	1	
HERC3	ENST00000431413	protein_coding	89513585	89573171	1	
HERC3	ENST00000422770	protein_coding	89513635	89571046	1	
HERC3	ENST00000407637	protein_coding	89513647	89578585	1	
HERC3	ENST00000426683	protein_coding	89514402	89571149	1	
HERC3	ENST00000452979	protein_coding	89514529	89574239	1	
HERC3	ENST00000264345	protein_coding	89526945	89629686	1	
HERC3	ENST00000470815	retained_intron	89579419	89591353	1	
HERC3	ENST00000543130	protein_coding	89579419	89628385	1	
HERC3	ENST00000504994	processed_transcript	89588607	89589804	1	
HERC3	ENST00000512194	protein_coding	89591290	89608450	1	
	ENST00000384793	snRNA	89605999	89606105	-1	
NAP1L5	ENST00000323061	protein_coding	89617066	89619386	-1	
FAM13A-AS1	ENST00000500765	antisense	89630940	89651254	1	
FAM13A-AS1	ENST00000511543	antisense	89642866	89649837	1	
FAM13A	ENST00000395002	protein_coding	89647106	89744512	-1	
FAM13A	ENST00000264344	protein_coding	89647106	89978323	-1	
FAM13A	ENST00000509478	retained_intron	89648220	89653172	-1	
FAM13A	ENST00000511573	retained_intron	89648220	89680620	-1	
FAM13A	ENST00000503556	protein_coding	89648577	89744382	-1	
FAM13A	ENST00000511976	protein_coding	89648580	89978311	-1	
FAM13A	ENST00000508369	protein_coding	89648806	89744352	-1	
FAM13A	ENST00000513837	protein_coding	89649330	89744381	-1	
FAM13A	ENST00000506433	processed_transcript	89652480	89657785	-1	
FAM13A	ENST00000504229	retained_intron	89652513	89653710	-1	
FAM13A	ENST00000502811	retained_intron	89652513	89653710	-1	
FAM13A	ENST00000504836	nonsense_mediated_decay	89652549	89744409	-1	
FAM13A	ENST00000508360	retained_intron	89652984	89671018	-1	
FAM13A	ENST00000511623	retained_intron	89653273	89658790	-1	
FAM13A	ENST00000507352	nonsense_mediated_decay	89670103	89744355	-1	
FAM13A	ENST00000515155	retained_intron	89671597	89680317	-1	
FAM13A	ENST00000502914	retained_intron	89679941	89689565	-1	
FAM13A	ENST00000502459	processed_transcript	89689134	90032549	-1	
#INTERACTIONS:
#chr	start1	end1	start2	end2	type	cell
89339201	89341201	89441940	89443940	promoter overlap	GM12878	
89339201	89341201	89441940	89443940	promoter overlap	GM12878	
89441801	89443801	89504123	89506123	promoter overlap	GM12878	
89441801	89443801	89504123	89506123	promoter overlap	GM12878	
89441801	89443801	89525945	89527945	promoter overlap	GM12878	
89441801	89443801	89525945	89527945	promoter overlap	GM12878	
89441940	89443940	89447201	89449201	promoter overlap	GM12878	
89441940	89443940	89447201	89449201	promoter overlap	GM12878	
89441940	89443940	89452801	89454801	promoter overlap	Foreskin keratinocyte	
89441940	89443940	89452801	89454801	promoter overlap	Foreskin keratinocyte	
89441940	89443940	89454001	89456001	promoter overlap	Foreskin fibroblast	
89441940	89443940	89454001	89456001	promoter overlap	Foreskin fibroblast	
89441940	89443940	89454201	89456201	promoter overlap	NHEK	
89441940	89443940	89454201	89456201	promoter overlap	NHLF	
89441940	89443940	89454201	89456201	promoter overlap	NHEK	
89441940	89443940	89454201	89456201	promoter overlap	NHLF	
89441940	89443940	89454401	89456401	promoter overlap	HMEC	
89441940	89443940	89454401	89456401	promoter overlap	HMEC	
89441940	89443940	89513001	89515001	promoter overlap	IMR90	
89441940	89443940	89513001	89515001	promoter overlap	IPS6.9	
89441940	89443940	89513001	89515001	promoter overlap	IMR90	
89441940	89443940	89513001	89515001	promoter overlap	IPS6.9	
89441940	89443940	89514001	89516001	promoter overlap	NHEK	
89441940	89443940	89514001	89516001	promoter overlap	NHEK	
89441940	89443940	89531601	89533601	promoter overlap	Foreskin fibroblast	
89441940	89443940	89531601	89533601	promoter overlap	Foreskin fibroblast	
89441940	89443940	89531801	89533801	promoter overlap	Foreskin keratinocyte	
89441940	89443940	89531801	89533801	promoter overlap	HSMM	
89441940	89443940	89531801	89533801	promoter overlap	Foreskin keratinocyte	
89441940	89443940	89531801	89533801	promoter overlap	HSMM	
89441940	89443940	89532601	89534601	promoter overlap	HMEC	
89441940	89443940	89532601	89534601	promoter overlap	HMEC	
89441940	89443940	89533578	89535578	promoter overlap	CD4 T	
89441940	89443940	89533578	89535578	promoter overlap	CD4 T	
89441940	89443940	89533801	89535801	promoter overlap	CD4 Naive	
89441940	89443940	89533801	89535801	promoter overlap	CD4 Naive	
89441940	89443940	89658401	89660401	promoter overlap	HSMM	
89441940	89443940	89658401	89660401	promoter overlap	HSMM	
89441940	89443940	89712801	89714801	promoter overlap	Foreskin keratinocyte	
89441940	89443940	89712801	89714801	promoter overlap	Foreskin keratinocyte	
89442001	89444001	89504123	89506123	promoter overlap	HUVEC	
89442001	89444001	89504123	89506123	promoter overlap	HUVEC	
89442001	89444001	89525945	89527945	promoter overlap	HUVEC	
89442001	89444001	89525945	89527945	promoter overlap	HUVEC